STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF18302.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (456 aa)    
Predicted Functional Partners:
OGF18332.1
GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
rplQ
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
OGF18300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.527
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
       0.464
OGF18299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.455
OGF18301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.455
OGF13179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.443
OGF13743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.432
OGF18297.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.409
OGF17313.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Eisenbacteria bacterium RBG167146
NCBI taxonomy Id: 1817856
Other names: C. Eisenbacteria bacterium RBG_16_71_46, Candidatus Eisenbacteria bacterium RBG_16_71_46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.