STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF46438.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (383 aa)    
Predicted Functional Partners:
OGF45210.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.946
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.933
OGF48133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.933
OGF45212.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.901
OGF45206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.900
A2231_12890
NADH dehydrogenase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.874
A2231_00100
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.869
OGF45220.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
OGF48702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.790
OGF50417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.761
Your Current Organism:
Firestonebacteria bacterium RIFOXYA2FULL408
NCBI taxonomy Id: 1817859
Other names: C. Firestonebacteria bacterium RIFOXYA2_FULL_40_8, Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_40_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.