STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAL-rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rhamnose isomerase family. (419 aa)    
Predicted Functional Partners:
OGF55498.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
OGF55172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.824
OGF54874.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.604
OGF54531.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
   
 0.520
OGF55496.1
YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
OGF53790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.460
OGF54195.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.451
OGF53293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.437
Your Current Organism:
Firestonebacteria bacterium RIFOXYC2FULL3967
NCBI taxonomy Id: 1817861
Other names: C. Firestonebacteria bacterium RIFOXYC2_FULL_39_67, Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.