STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF64883.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (353 aa)    
Predicted Functional Partners:
OGF68206.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.975
A2Y62_18085
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.967
OGF67057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.953
OGF65759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.926
OGF59684.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.860
A2Y62_05875
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.838
A2Y62_12175
Sodium:proton antiporter; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.785
mqnC
Succinate dehydrogenase, cytochrome b556 subunit; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
   
    0.785
A2Y62_02805
Hypothetical protein; Too many ambiguous residues; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.753
A2Y62_07110
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.740
Your Current Organism:
Fischerbacteria bacterium RBG13378
NCBI taxonomy Id: 1817863
Other names: C. Fischerbacteria bacterium RBG_13_37_8, Candidatus Fischerbacteria bacterium RBG_13_37_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.