STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF55078.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (281 aa)    
Predicted Functional Partners:
OGF55077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.778
OGF55079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.768
OGF55076.1
benzoyl-CoA reductase, bzd-type, subunit N; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
OGF55099.1
CoA activase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
OGF55075.1
benzoyl-CoA reductase, bzd-type, subunit O; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
A2Z21_04605
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.606
OGF55074.1
benzoyl-CoA reductase, bzd-type, subunit Q; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.606
OGF53278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.532
OGF54418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.493
nbaC
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
    
  0.493
Your Current Organism:
Fraserbacteria bacterium RBG16559
NCBI taxonomy Id: 1817864
Other names: C. Fraserbacteria bacterium RBG_16_55_9, Candidatus Fraserbacteria bacterium RBG_16_55_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.