STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF57027.1Cation transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (223 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
    0.622
OGF57026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.593
OGF57029.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
OGF53347.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.509
OGF57181.1
DtxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.488
OGF57025.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.477
Your Current Organism:
Fraserbacteria bacterium RBG16559
NCBI taxonomy Id: 1817864
Other names: C. Fraserbacteria bacterium RBG_16_55_9, Candidatus Fraserbacteria bacterium RBG_16_55_9
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