STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGG05179.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (672 aa)    
Predicted Functional Partners:
OGG05178.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.778
fliW
Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
     0.644
A3F83_17135
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.640
OGG00823.1
Flagellar biosynthesis protein FlhF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.624
OGG05310.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.526
OGG05157.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.508
A3F83_08330
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.490
OGG03216.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.445
OGG05180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the uroporphyrinogen decarboxylase family.
       0.429
OGG05383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Glassbacteria bacterium RIFCSPLOWO212FULL5811
NCBI taxonomy Id: 1817867
Other names: C. Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11, Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.