STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH59208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)    
Predicted Functional Partners:
OGH59207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGH60962.1
Phosphoribosylaminoimidazole carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.695
OGH59995.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.691
aspA
Aspartate ammonia-lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.529
OGH59209.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.440
OGH59676.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.406
Your Current Organism:
Lindowbacteria bacterium RIFCSPLOWO212FULL6227
NCBI taxonomy Id: 1817870
Other names: C. Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27, Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.