STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH59574.1Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
OGH59575.1
Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.947
OGH59577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.945
OGH59578.1
Type I restriction-modification system subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
OGH59603.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.774
OGH59576.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGH59579.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.718
OGH59046.1
Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.685
OGH59312.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
OGH59604.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
OGH59580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.512
Your Current Organism:
Lindowbacteria bacterium RIFCSPLOWO212FULL6227
NCBI taxonomy Id: 1817870
Other names: C. Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27, Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.