STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH60948.1Nitrogen fixation protein NifD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family. (106 aa)    
Predicted Functional Partners:
OGH60986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.945
OGH63333.1
Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.904
OGH59999.1
Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.891
OGH60427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.853
OGH63271.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.853
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.819
OGH60951.1
Nitrogen fixation protein NifD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family.
 
    
0.791
OGH60949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.785
OGH60950.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.784
OGH61019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.608
Your Current Organism:
Lindowbacteria bacterium RIFCSPLOWO212FULL6227
NCBI taxonomy Id: 1817870
Other names: C. Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27, Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.