STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH94117.1Histone-like DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)    
Predicted Functional Partners:
OGH97379.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.822
OGH96003.1
30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.820
OGH99249.1
DNA primase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.819
OGH98316.1
Chromosomal replication initiation protein DnaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.802
OGH97231.1
Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.784
OGH95392.1
Subtype I-C CRISPR-associated endonuclease Cas1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.694
OGH95413.1
CRISPR-associated endonuclease Cas1; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.694
OGH98538.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.694
OGH98885.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.694
OGH95866.1
Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.675
Your Current Organism:
Margulisbacteria bacterium GWD239127
NCBI taxonomy Id: 1817871
Other names: C. Margulisbacteria bacterium GWD2_39_127, Candidatus Margulisbacteria bacterium GWD2_39_127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.