STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH94511.1glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)    
Predicted Functional Partners:
OGH99628.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
OGH99638.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.996
OGH99650.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
OGH99631.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.995
OGH99639.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.995
OGH99636.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.994
OGH99629.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
OGH99669.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
OGH99641.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
OGH99621.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.992
Your Current Organism:
Margulisbacteria bacterium GWD239127
NCBI taxonomy Id: 1817871
Other names: C. Margulisbacteria bacterium GWD2_39_127, Candidatus Margulisbacteria bacterium GWD2_39_127
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