STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH95463.1Ribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
OGH98827.1
GTPase Era; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
OGH97292.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.947
OGH96473.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.943
OGH96085.1
RNA helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.940
OGH99651.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.936
OGH96537.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
OGH99650.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.929
OGH99621.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.926
OGH99648.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.919
OGH97931.1
Ribosome recycling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.918
Your Current Organism:
Margulisbacteria bacterium GWD239127
NCBI taxonomy Id: 1817871
Other names: C. Margulisbacteria bacterium GWD2_39_127, Candidatus Margulisbacteria bacterium GWD2_39_127
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.