STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH98728.1Capsule biosynthesis protein CapI; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
OGH99630.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.967
OGH99621.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.959
OGH99632.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.958
OGH99668.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.957
OGH99625.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.956
OGH99640.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.956
OGH99622.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.955
OGH99637.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.955
OGH99644.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.955
OGH99627.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.954
Your Current Organism:
Margulisbacteria bacterium GWD239127
NCBI taxonomy Id: 1817871
Other names: C. Margulisbacteria bacterium GWD2_39_127, Candidatus Margulisbacteria bacterium GWD2_39_127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.