STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH97987.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (233 aa)    
Predicted Functional Partners:
OGH97986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGH99619.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.734
OGH99620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.724
OGH99647.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.724
OGH98830.1
RNA polymerase sigma factor RpoD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.695
A2X43_10990
tRNA-Met; Metagenomic; derived from metagenome: subsurface metagenome.
    
   0.695
OGH99282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.695
OGH97988.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.685
OGH99306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.669
OGH95621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.668
Your Current Organism:
Margulisbacteria bacterium GWD239127
NCBI taxonomy Id: 1817871
Other names: C. Margulisbacteria bacterium GWD2_39_127, Candidatus Margulisbacteria bacterium GWD2_39_127
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.