STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH98896.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)    
Predicted Functional Partners:
OGH98300.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.922
OGH94154.1
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.920
OGH96472.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
   0.918
OGH99251.1
Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
OGH96474.1
GTPase ObgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.908
OGH94896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.908
OGH99626.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.899
OGH99615.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.896
OGH99635.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.894
OGH99641.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.893
Your Current Organism:
Margulisbacteria bacterium GWD239127
NCBI taxonomy Id: 1817871
Other names: C. Margulisbacteria bacterium GWD2_39_127, Candidatus Margulisbacteria bacterium GWD2_39_127
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.