STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGL54535.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (241 aa)    
Predicted Functional Partners:
OGL53286.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.990
OGL52601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.974
OGL54536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
OGL54537.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
OGL54538.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
OGL52687.1
Protein TolQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.917
OGL52561.1
Protein TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.877
OGL54029.1
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
     
 0.632
OGL51293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.617
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.616
Your Current Organism:
Schekmanbacteria bacterium RIFCSPLOWO212FULL3815
NCBI taxonomy Id: 1817883
Other names: C. Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15, Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.