STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ98188.1phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (791 aa)    
Predicted Functional Partners:
OGJ98330.1
phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OGJ96540.1
leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.995
OGJ99369.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
OGJ96874.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
OGJ96885.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.974
OGJ98912.1
GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.974
OGJ96898.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.971
OGJ96883.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
OGJ96896.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.959
OGJ98184.1
threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.958
Your Current Organism:
Raymondbacteria bacterium RIFOXYC2FULL5021
NCBI taxonomy Id: 1817889
Other names: C. Raymondbacteria bacterium RIFOXYC2_FULL_50_21, Candidatus Raymondbacteria bacterium RIFOXYC2_FULL_50_21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.