STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ97008.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)    
Predicted Functional Partners:
OGJ97010.1
Recombination protein RecR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.901
OGJ96634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.897
OGJ94957.1
Nicotinate-nucleotide diphosphorylase (carboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.875
OGJ98199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.867
OGJ97011.1
Nucleoid-associated protein, YbaB/EbfC family; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.849
OGJ97009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.828
OGJ98775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.821
OGJ97716.1
L-aspartate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.813
OGJ98069.1
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.804
OGJ98072.1
D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.804
Your Current Organism:
Raymondbacteria bacterium RIFOXYC2FULL5021
NCBI taxonomy Id: 1817889
Other names: C. Raymondbacteria bacterium RIFOXYC2_FULL_50_21, Candidatus Raymondbacteria bacterium RIFOXYC2_FULL_50_21
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.