STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ98641.1DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)    
Predicted Functional Partners:
OGJ97467.1
DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.953
OGJ98066.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
OGJ97704.1
DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.870
OGJ95897.1
Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.820
OGJ99181.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.788
OGJ97005.1
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.760
OGJ97961.1
Flagellar biosynthetic protein FliP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.755
OGJ98643.1
DNA repair protein RecO; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.754
OGJ95905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.700
OGJ98642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.696
Your Current Organism:
Raymondbacteria bacterium RIFOXYC2FULL5021
NCBI taxonomy Id: 1817889
Other names: C. Raymondbacteria bacterium RIFOXYC2_FULL_50_21, Candidatus Raymondbacteria bacterium RIFOXYC2_FULL_50_21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.