STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ98548.1Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: GeneMarkS+. (605 aa)    
Predicted Functional Partners:
OGJ98549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
OGJ98547.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.782
OGJ98550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.746
OGJ98298.1
aspartyl/glutamyl-tRNA amidotransferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.584
OGJ95820.1
Ribosomal-protein-alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.566
OGJ99202.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.565
OGJ98855.1
D-alanine--D-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.557
OGJ98274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.554
OGJ97902.1
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.549
OGJ98539.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.534
Your Current Organism:
Raymondbacteria bacterium RIFOXYC2FULL5021
NCBI taxonomy Id: 1817889
Other names: C. Raymondbacteria bacterium RIFOXYC2_FULL_50_21, Candidatus Raymondbacteria bacterium RIFOXYC2_FULL_50_21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.