STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ96217.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (349 aa)    
Predicted Functional Partners:
OGJ97899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.740
OGJ96763.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.736
OGJ94938.1
Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.717
OGJ98912.1
GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.693
OGJ98188.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.688
OGJ95278.1
Trigger factor; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.563
OGJ95061.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.559
OGJ96218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.542
OGJ95953.1
Ribose-phosphate pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.501
OGJ99107.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.501
Your Current Organism:
Raymondbacteria bacterium RIFOXYC2FULL5021
NCBI taxonomy Id: 1817889
Other names: C. Raymondbacteria bacterium RIFOXYC2_FULL_50_21, Candidatus Raymondbacteria bacterium RIFOXYC2_FULL_50_21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.