STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIN96196.1Nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (137 aa)    
Predicted Functional Partners:
OIN97440.1
PemK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.666
OIN97337.1
PemK family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.666
OIN96461.1
Hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.666
OIN96062.1
Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.666
OIN96197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.517
OIN96195.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.488
acsA
acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
    
  0.474
OIN97689.1
acetyl-CoA decarbonylase/synthase complex subunit delta; Part of a complex that catalyzes the cleavage of acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.459
OIN96200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.451
OIN96201.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
Your Current Organism:
Desantisbacteria bacterium CG1023846
NCBI taxonomy Id: 1817893
Other names: C. Desantisbacteria bacterium CG1_02_38_46, Candidatus Desantisbacteria bacterium CG1_02_38_46
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.