STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC36430.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (208 aa)    
Predicted Functional Partners:
OGC35855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.787
OGC35881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.745
OGC36117.1
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.734
OGC36217.1
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.734
OGC35907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.712
OGC36194.1
aspartate--tRNA(Asn) ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.702
OGC36056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.700
OGC36319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.680
glyA
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.673
OGC36431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.664
Your Current Organism:
candidate division WS6 bacterium RIFOXYB1FULL3315
NCBI taxonomy Id: 1817897
Other names: c. division WS6 bacterium RIFOXYB1_FULL_33_15, candidate division WS6 bacterium RIFOXYB1_FULL_33_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.