STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_004425Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (309 aa)    
Predicted Functional Partners:
CVT24_009376
Uncharacterized protein.
    
 0.999
CVT24_003815
SAGA-associated factor 11.
    
 0.982
CVT24_003877
Uncharacterized protein.
    
 0.938
CVT24_009398
Uncharacterized protein.
    
 0.920
CVT24_006098
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.879
CVT24_009540
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.879
CVT24_000615
Uncharacterized protein.
    
 0.837
CVT24_006560
Uncharacterized protein.
    
 0.828
CVT24_007839
F-box domain-containing protein.
    
 
 0.812
CVT24_008152
Uncharacterized protein.
    
 0.803
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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