STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_004939OBG-type G domain-containing protein. (368 aa)    
Predicted Functional Partners:
CVT24_008615
Uncharacterized protein.
   
 
 0.994
CVT24_012786
RWD domain-containing protein.
   
 
 0.934
CVT24_003896
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.889
CVT24_011569
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.869
CVT24_007793
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
   0.854
CVT24_003605
Uncharacterized protein.
    
   0.848
CVT24_003622
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 
 0.848
CVT24_012592
Ribosomal_L2_C domain-containing protein.
   
 
 0.848
CVT24_006160
Uncharacterized protein.
   
 
 0.835
CVT24_000011
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.833
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.