STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_008615Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
CVT24_004939
OBG-type G domain-containing protein.
   
 
 0.994
CVT24_004287
OBG-type G domain-containing protein.
   
 
 0.951
CVT24_002839
Uncharacterized protein.
   
 
 0.921
CVT24_006160
Uncharacterized protein.
   
 
 0.886
CVT24_002763
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.862
CVT24_003896
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.862
CVT24_004020
Ribosomal_L18_c domain-containing protein.
   
   0.854
CVT24_011768
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.847
CVT24_006513
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.846
CVT24_002016
TPR_REGION domain-containing protein.
   
   0.846
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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