STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_003068Aminopeptidase. (890 aa)    
Predicted Functional Partners:
CVT24_000927
CYTOSOL_AP domain-containing protein.
  
 0.869
CVT24_008906
Tryptophan synthase.
    
 0.830
CVT24_000595
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.808
CVT24_008922
Aspartate aminotransferase.
   
 0.804
CVT24_011571
Aspartate aminotransferase.
   
 0.804
CVT24_007733
RPA_C domain-containing protein.
   
 
 0.769
CVT24_003565
Ubiquitin-like domain-containing protein.
    
  0.742
CVT24_006079
Uncharacterized protein.
     
 0.731
CVT24_003969
Uncharacterized protein.
     
 0.731
CVT24_003415
ATP-synt_DE_N domain-containing protein.
     
 0.722
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.