STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_002757DNA ligase. (1009 aa)    
Predicted Functional Partners:
CVT24_007075
SAP domain-containing protein.
  
 0.985
CVT24_011306
VWFA domain-containing protein.
   
 0.982
CVT24_005013
DRMBL domain-containing protein.
   
 0.890
CVT24_005645
Uncharacterized protein.
  
 0.859
CVT24_003676
BRCT domain-containing protein.
  
 0.852
CVT24_009801
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.841
CVT24_004530
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
  
 0.841
CVT24_006622
HRDC domain-containing protein.
    
 0.841
CVT24_008954
PCNA_N domain-containing protein.
   
 0.836
CVT24_006352
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.836
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.