STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_002764Uncharacterized protein. (1728 aa)    
Predicted Functional Partners:
CVT24_006290
HECT domain-containing protein.
     
 0.718
CVT24_003565
Ubiquitin-like domain-containing protein.
    
  0.671
CVT24_008912
AN1-type domain-containing protein.
   
  0.641
CVT24_003194
Ubiquitin-like domain-containing protein.
   
  0.641
CVT24_007564
Uncharacterized protein.
    
  0.634
CVT24_005912
E2_bind domain-containing protein.
    
  0.499
CVT24_008678
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
  0.499
CVT24_011772
Ubiquitin-like domain-containing protein.
    
  0.476
CVT24_003165
Uncharacterized protein.
    
  0.476
CVT24_000174
Uncharacterized protein.
    
  0.476
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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