STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_000357Exonuclease domain-containing protein. (391 aa)    
Predicted Functional Partners:
CVT24_005629
Ribosomal_L7Ae domain-containing protein.
     
 0.665
CVT24_003768
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
  0.663
CVT24_009547
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
     
 0.656
CVT24_009107
Ribos_L4_asso_C domain-containing protein.
    
 0.647
CVT24_012592
Ribosomal_L2_C domain-containing protein.
   
 
  0.647
CVT24_005549
Ipi1_N domain-containing protein.
   
 
  0.643
CVT24_001987
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
     
 0.636
CVT24_006266
Uncharacterized protein.
    
  0.633
CVT24_000808
Ribosomal_L16 domain-containing protein.
     
 0.632
CVT24_006216
RNase_PH domain-containing protein.
    
 0.599
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.