CVT24_006433 protein (Panaeolus cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

CVT24_006433

Uncharacterized protein. (649 aa)

Predicted Functional Partners:

CVT24_009975

0.961

CVT24_013192

0.948

CVT24_008398

0.854

CVT24_009561

0.823

CVT24_005096

0.818

CVT24_003440

0.810

CVT24_005322

0.810

CVT24_000329

0.807

CVT24_003452

0.807

CVT24_002195

0.775

Your Current Organism:

Panaeolus cyanescens

NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT24_000329	CVT24_003440	A0A409VJ22	A0A409Y721	Uncharacterized protein.	T-complex protein.	0.836
CVT24_000329	CVT24_005096	A0A409VJ22	A0A409VPT3	Uncharacterized protein.	Uncharacterized protein.	0.797
CVT24_000329	CVT24_005322	A0A409VJ22	A0A409Y8V1	Uncharacterized protein.	Uncharacterized protein.	0.796
CVT24_000329	CVT24_006433	A0A409VJ22	A0A409VZ95	Uncharacterized protein.	Uncharacterized protein.	0.807
CVT24_000329	CVT24_008398	A0A409VJ22	A0A409VEF1	Uncharacterized protein.	Uncharacterized protein.	0.988
CVT24_000329	CVT24_009561	A0A409VJ22	A0A409YA95	Uncharacterized protein.	Uncharacterized protein.	0.799
CVT24_000329	CVT24_009975	A0A409VJ22	A0A409VXG0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.880
CVT24_000329	CVT24_013192	A0A409VJ22	A0A409WD83	Uncharacterized protein.	Uncharacterized protein.	0.831
CVT24_002195	CVT24_003440	A0A409YI13	A0A409Y721	Uncharacterized protein.	T-complex protein.	0.794
CVT24_002195	CVT24_005096	A0A409YI13	A0A409VPT3	Uncharacterized protein.	Uncharacterized protein.	0.763
CVT24_002195	CVT24_005322	A0A409YI13	A0A409Y8V1	Uncharacterized protein.	Uncharacterized protein.	0.762
CVT24_002195	CVT24_006433	A0A409YI13	A0A409VZ95	Uncharacterized protein.	Uncharacterized protein.	0.775
CVT24_002195	CVT24_008398	A0A409YI13	A0A409VEF1	Uncharacterized protein.	Uncharacterized protein.	0.954
CVT24_002195	CVT24_009561	A0A409YI13	A0A409YA95	Uncharacterized protein.	Uncharacterized protein.	0.666
CVT24_002195	CVT24_009975	A0A409YI13	A0A409VXG0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.813
CVT24_002195	CVT24_013192	A0A409YI13	A0A409WD83	Uncharacterized protein.	Uncharacterized protein.	0.791
CVT24_003440	CVT24_000329	A0A409Y721	A0A409VJ22	T-complex protein.	Uncharacterized protein.	0.836
CVT24_003440	CVT24_002195	A0A409Y721	A0A409YI13	T-complex protein.	Uncharacterized protein.	0.794
CVT24_003440	CVT24_003452	A0A409Y721	A0A409Y6S6	T-complex protein.	Serine/threonine-protein phosphatase.	0.836
CVT24_003440	CVT24_005096	A0A409Y721	A0A409VPT3	T-complex protein.	Uncharacterized protein.	0.999