CVT24_002066 protein (Panaeolus cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT24_002066

Uncharacterized protein. (612 aa)

Predicted Functional Partners:

CVT24_010037

0.781

CVT24_012860

0.612

CVT24_008016

0.511

CVT24_005662

0.504

CVT24_010714

0.503

CVT24_003861

0.499

CVT24_008279

0.497

CVT24_008865

0.468

CVT24_011126

0.458

CVT24_005645

0.456

Your Current Organism:

Panaeolus cyanescens

NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT24_002066	CVT24_003861	A0A409W1H0	A0A409W8J1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.499
CVT24_002066	CVT24_005645	A0A409W1H0	A0A409VDT1	Uncharacterized protein.	Uncharacterized protein.	0.456
CVT24_002066	CVT24_005662	A0A409W1H0	A0A409VBQ7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.504
CVT24_002066	CVT24_008016	A0A409W1H0	A0A409YQX9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.511
CVT24_002066	CVT24_008279	A0A409W1H0	A0A409YQH2	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.497
CVT24_002066	CVT24_008865	A0A409W1H0	A0A409VAW7	Uncharacterized protein.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.468
CVT24_002066	CVT24_010037	A0A409W1H0	A0A409W9D4	Uncharacterized protein.	HSF_DOMAIN domain-containing protein.	0.781
CVT24_002066	CVT24_010714	A0A409W1H0	A0A409YNI3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.503
CVT24_002066	CVT24_011126	A0A409W1H0	A0A409YG65	Uncharacterized protein.	Protein kinase domain-containing protein.	0.458
CVT24_002066	CVT24_012860	A0A409W1H0	A0A409W6K4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.612
CVT24_003861	CVT24_002066	A0A409W8J1	A0A409W1H0	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.499
CVT24_003861	CVT24_005662	A0A409W8J1	A0A409VBQ7	Non-specific serine/threonine protein kinase.	Protein kinase domain-containing protein.	0.523
CVT24_003861	CVT24_010714	A0A409W8J1	A0A409YNI3	Non-specific serine/threonine protein kinase.	Protein kinase domain-containing protein.	0.430
CVT24_005645	CVT24_002066	A0A409VDT1	A0A409W1H0	Uncharacterized protein.	Uncharacterized protein.	0.456
CVT24_005662	CVT24_002066	A0A409VBQ7	A0A409W1H0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.504
CVT24_005662	CVT24_003861	A0A409VBQ7	A0A409W8J1	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.523
CVT24_005662	CVT24_008016	A0A409VBQ7	A0A409YQX9	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.620
CVT24_005662	CVT24_008279	A0A409VBQ7	A0A409YQH2	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.572
CVT24_005662	CVT24_010037	A0A409VBQ7	A0A409W9D4	Protein kinase domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.409
CVT24_005662	CVT24_011126	A0A409VBQ7	A0A409YG65	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.579