STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_010136Uncharacterized protein. (418 aa)    
Predicted Functional Partners:
CVT24_006154
PINc domain-containing protein.
   
 0.999
CVT24_005768
Uncharacterized protein.
   
 0.999
CVT24_010360
WD_REPEATS_REGION domain-containing protein.
   
 0.999
CVT24_009189
WD_REPEATS_REGION domain-containing protein.
   
  0.999
CVT24_009036
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
CVT24_002291
CBF domain-containing protein.
   
 0.999
CVT24_012594
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
  
 0.999
CVT24_011991
Uncharacterized protein.
   
 0.998
CVT24_000017
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.998
CVT24_011700
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
  0.998
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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