STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_006853Uncharacterized protein. (1490 aa)    
Predicted Functional Partners:
CVT24_003983
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.759
CVT24_005769
Uncharacterized protein.
    
 
 0.752
CVT24_008673
Uncharacterized protein.
    
 
 0.743
CVT24_008705
Uncharacterized protein.
   
 
 0.739
CVT24_007279
SGF29 C-terminal domain-containing protein.
    
 
 0.732
CVT24_006763
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.714
CVT24_002126
TFIID_20kDa domain-containing protein.
    
 
 0.714
CVT24_007043
Uncharacterized protein.
    
 
 0.644
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
    
 
 0.629
CVT24_010820
Uncharacterized protein; Belongs to the peptidase S8 family.
    
   0.624
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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