STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_002383NodB homology domain-containing protein. (287 aa)    
Predicted Functional Partners:
CVT24_002562
Uncharacterized protein.
    
 0.747
CVT24_005079
Uncharacterized protein.
    
 0.744
CVT24_000661
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.667
CVT24_011349
Uncharacterized protein.
     
 0.638
CVT24_005357
Uncharacterized protein.
    
 0.627
CVT24_000381
Uncharacterized protein.
    
 0.627
CVT24_001363
Uncharacterized protein.
    
  0.618
CVT24_009865
Uncharacterized protein.
    
 0.573
CVT24_010121
Uncharacterized protein.
    
 0.573
CVT24_005338
Uncharacterized protein.
    
 0.573
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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