STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_003749PseudoU_synth_2 domain-containing protein. (281 aa)    
Predicted Functional Partners:
CVT24_003621
Uncharacterized protein.
    
 
 0.883
CVT24_013285
Uncharacterized protein.
   
 
 0.842
CVT24_000785
G domain-containing protein.
   
 
 0.816
CVT24_001369
Uncharacterized protein.
    
 
 0.814
CVT24_005548
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.813
CVT24_005547
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.810
CVT24_005739
Ribosomal_L18e/L15P domain-containing protein.
   
   0.808
CVT24_002897
EngB-type G domain-containing protein.
   
 
 0.807
CVT24_005945
KOW domain-containing protein.
   
   0.806
CVT24_001716
Uncharacterized protein.
  
   0.805
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.