CVT24_005245 protein (Panaeolus cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT24_005245

Uncharacterized protein. (710 aa)

Predicted Functional Partners:

CVT24_000144

0.906

CVT24_006655

0.889

CVT24_011586

0.707

CVT24_004261

0.690

CVT24_000258

0.690

CVT24_000202

0.689

CVT24_006719

0.687

CVT24_005559

0.652

CVT24_002243

0.643

CVT24_002562

0.636

Your Current Organism:

Panaeolus cyanescens

NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT24_000144	CVT24_005245	A0A409WBT8	A0A409Y901	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.906
CVT24_000144	CVT24_006655	A0A409WBT8	A0A409YSG4	Pyruvate carboxyltransferase domain-containing protein.	Protein BTN.	0.862
CVT24_000202	CVT24_004261	A0A409VIK8	A0A409VA85	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.603
CVT24_000202	CVT24_005245	A0A409VIK8	A0A409Y901	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein.	0.689
CVT24_000202	CVT24_005559	A0A409VIK8	A0A409VQB3	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	0.999
CVT24_000202	CVT24_006719	A0A409VIK8	A0A409V9G6	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein.	0.999
CVT24_000258	CVT24_005245	A0A409YD88	A0A409Y901	Uncharacterized protein.	Uncharacterized protein.	0.690
CVT24_002243	CVT24_002562	A0A409YIB2	A0A409YTW9	Uncharacterized protein.	Uncharacterized protein.	0.725
CVT24_002243	CVT24_005245	A0A409YIB2	A0A409Y901	Uncharacterized protein.	Uncharacterized protein.	0.643
CVT24_002562	CVT24_002243	A0A409YTW9	A0A409YIB2	Uncharacterized protein.	Uncharacterized protein.	0.725
CVT24_002562	CVT24_005245	A0A409YTW9	A0A409Y901	Uncharacterized protein.	Uncharacterized protein.	0.636
CVT24_004261	CVT24_000202	A0A409VA85	A0A409VIK8	Uncharacterized protein; Belongs to the protein kinase superfamily.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.603
CVT24_004261	CVT24_005245	A0A409VA85	A0A409Y901	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.690
CVT24_005245	CVT24_000144	A0A409Y901	A0A409WBT8	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.906
CVT24_005245	CVT24_000202	A0A409Y901	A0A409VIK8	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.689
CVT24_005245	CVT24_000258	A0A409Y901	A0A409YD88	Uncharacterized protein.	Uncharacterized protein.	0.690
CVT24_005245	CVT24_002243	A0A409Y901	A0A409YIB2	Uncharacterized protein.	Uncharacterized protein.	0.643
CVT24_005245	CVT24_002562	A0A409Y901	A0A409YTW9	Uncharacterized protein.	Uncharacterized protein.	0.636
CVT24_005245	CVT24_004261	A0A409Y901	A0A409VA85	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.690
CVT24_005245	CVT24_005559	A0A409Y901	A0A409VQB3	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	0.652