STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_001884Histone H2B; Belongs to the histone H2B family. (146 aa)    
Predicted Functional Partners:
CVT24_006261
Uncharacterized protein.
    
 0.996
CVT24_010253
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.986
CVT24_009457
Histone H3; Belongs to the histone H3 family.
 
 
 0.971
CVT24_001611
Histone H3; Belongs to the histone H3 family.
 
 
 0.970
CVT24_009435
Histone H3; Belongs to the histone H3 family.
 
 
 0.970
CVT24_001887
Histone H2A; Belongs to the histone H2A family.
 
 0.961
CVT24_001882
Histone H2A; Belongs to the histone H2A family.
 
 0.960
CVT24_008725
Histone H2A; Belongs to the histone H2A family.
   
 0.945
CVT24_009295
Uncharacterized protein.
   
 0.930
CVT24_008133
Uncharacterized protein.
 
  
 0.917
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.