STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_005767Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (368 aa)    
Predicted Functional Partners:
CVT24_012035
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
   
 
 0.957
CVT24_002635
AlaDh_PNT_N domain-containing protein.
   
 
0.950
CVT24_009936
Uncharacterized protein.
   
 
 0.829
CVT24_012261
Carrier domain-containing protein.
 
 
 0.745
CVT24_011057
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.741
CVT24_005436
Iso_dh domain-containing protein.
   
  
 0.633
CVT24_001437
Semialdhyde_dh domain-containing protein.
   
 
 0.631
CVT24_003224
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.620
CVT24_009334
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
  
 0.560
CVT24_002034
GTP_cyclohydroI domain-containing protein.
    
   0.560
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.