STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_007742TruB_N domain-containing protein. (335 aa)    
Predicted Functional Partners:
CVT24_005750
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.986
CVT24_011705
Uncharacterized protein.
   
 0.980
CVT24_003712
Nop domain-containing protein.
   
 
 0.979
CVT24_012598
Nop domain-containing protein.
  
 
 0.975
CVT24_006421
CS domain-containing protein.
   
 0.973
CVT24_006781
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.964
CVT24_011768
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.920
CVT24_007673
Ribosomal_L7Ae domain-containing protein.
  
 0.920
CVT24_002078
Uncharacterized protein.
  
 0.920
CVT24_005386
Tr-type G domain-containing protein.
  
 
 0.905
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.