STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_007740Uncharacterized protein; Belongs to the DapA family. (346 aa)    
Predicted Functional Partners:
CVT24_004399
MR_MLE domain-containing protein.
     
 0.734
CVT24_008906
Tryptophan synthase.
    
  0.723
CVT24_005639
Uncharacterized protein.
   
 
 0.697
CVT24_003415
ATP-synt_DE_N domain-containing protein.
    
 0.679
CVT24_011571
Aspartate aminotransferase.
   
 0.669
CVT24_012370
Uncharacterized protein; Belongs to the dihydrofolate reductase family.
  
 
 0.665
CVT24_008922
Aspartate aminotransferase.
   
  0.648
CVT24_009741
Malate synthase; Belongs to the malate synthase family.
   
 
 0.647
CVT24_007837
Isocitrate lyase.
   
 
  0.611
CVT24_007971
Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.611
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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