STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_011873Fe2OG dioxygenase domain-containing protein. (746 aa)    
Predicted Functional Partners:
CVT24_002839
Uncharacterized protein.
   
 
 0.991
CVT24_006160
Uncharacterized protein.
   
 
 0.904
CVT24_012082
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.851
CVT24_012572
CHY-type domain-containing protein.
 
      0.664
CVT24_006313
BHLH domain-containing protein.
   
 
 0.626
CVT24_003371
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.622
CVT24_002488
Uncharacterized protein.
   
  
 0.607
CVT24_004569
Bms1-type G domain-containing protein.
   
    0.606
CVT24_010388
Uncharacterized protein.
   
   0.595
CVT24_009577
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.582
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.