STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_007160DNA_binding_1 domain-containing protein. (151 aa)    
Predicted Functional Partners:
CVT24_005921
ENDO3c domain-containing protein.
  
 
 0.709
CVT24_006290
HECT domain-containing protein.
    
 
 0.565
CVT24_010337
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.491
CVT24_010561
2OG-FeII_Oxy_2 domain-containing protein.
  
  
 0.491
CVT24_011614
DNA_mis_repair domain-containing protein.
   
 
 0.487
CVT24_002487
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.483
CVT24_000661
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
  
 0.472
CVT24_005703
RF_PROK_I domain-containing protein.
     
 0.447
CVT24_007662
J domain-containing protein.
     
 0.447
CVT24_003600
Photolyase/cryptochrome alpha/beta domain-containing protein.
     
 0.447
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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