STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_001717Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (319 aa)    
Predicted Functional Partners:
CVT24_000055
SMC_N domain-containing protein.
   
 0.983
CVT24_005952
zf-RING-like domain-containing protein.
   
 0.981
CVT24_007987
SP-RING-type domain-containing protein.
    
 0.980
CVT24_000939
Uncharacterized protein.
   
 0.975
CVT24_008203
SMC_N domain-containing protein.
   
 0.971
CVT24_010578
SMC hinge domain-containing protein.
   
 0.869
CVT24_006623
Structural maintenance of chromosomes protein.
   
 0.869
CVT24_013353
Structural maintenance of chromosomes protein.
   
 0.865
CVT24_002479
Uncharacterized protein.
   
 0.865
CVT24_011690
SMC hinge domain-containing protein.
   
 0.818
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.