STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_001573AA_permease domain-containing protein. (571 aa)    
Predicted Functional Partners:
CVT24_006159
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 
 0.595
CVT24_009596
Protein kinase domain-containing protein.
    
 0.573
CVT24_010861
Aamy domain-containing protein.
 
  
 0.529
CVT24_011895
Fe2OG dioxygenase domain-containing protein.
    
 0.529
CVT24_001457
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. Belongs to the EPSP synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family.
   
 0.527
CVT24_008913
Aamy domain-containing protein.
    
  0.514
CVT24_009976
Aamy domain-containing protein.
    
  0.514
CVT24_000167
Alpha-amylase.
    
  0.514
CVT24_005235
Alpha-amylase.
    
  0.514
CVT24_003450
GH-13.
 
  
  0.514
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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