STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODB95585.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (921 aa)    
Predicted Functional Partners:
ODB95586.1
RNA polymerase-associated protein rapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.895
ODB95587.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.849
ODB98451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.780
ODB96963.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
ODB98449.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.772
ODB97098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.770
ODB98450.1
DUF1302 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.765
ODB97968.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.754
ODB98297.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.750
ODB98667.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
Your Current Organism:
Thiodiazotropha endoloripes
NCBI taxonomy Id: 1818881
Other names: C. Thiodiazotropha endoloripes, Candidatus Thiodiazotropha endoloripes, endosymbiont of Loripes lucinalis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.