STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001644195_00005Unannotated protein. (356 aa)    
Predicted Functional Partners:
GCA_001644195_01570
Unannotated protein.
    
  0.896
GCA_001644195_03258
Unannotated protein.
   
  0.872
GCA_001644195_03281
Unannotated protein.
    
 0.807
GCA_001644195_00010
Unannotated protein.
 
 
  0.806
GCA_001644195_00008
Unannotated protein.
 
  
 0.805
GCA_001644195_02278
Unannotated protein.
    
  0.805
GCA_001644195_04136
Unannotated protein.
 
 
 0.797
GCA_001644195_00006
Unannotated protein.
 
  
  0.768
GCA_001644195_00007
Unannotated protein.
 
  
  0.745
GCA_001644195_00009
Unannotated protein.
 
    0.728
Your Current Organism:
Bacillus marinisedimentorum
NCBI taxonomy Id: 1821260
Other names: B. marinisedimentorum, Bacillus marinisedimentorum Guo et al. 2018, Bacillus sp. NC2-31, KCTC 33721, MCCC 1K01239, strain NC2-31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.