STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661495_00268Unannotated protein. (404 aa)    
Predicted Functional Partners:
GCA_001661495_00269
Unannotated protein.
 
     0.876
GCA_001661495_04069
Unannotated protein.
 
     0.659
GCA_001661495_02293
Unannotated protein.
  
 
 0.637
GCA_001661495_01667
Unannotated protein.
  
     0.627
GCA_001661495_03678
Unannotated protein.
  
     0.615
GCA_001661495_00152
Unannotated protein.
  
     0.601
GCA_001661495_03069
Unannotated protein.
  
     0.591
GCA_001661495_00945
Unannotated protein.
  
     0.577
GCA_001661495_03726
Unannotated protein.
  
     0.572
GCA_001661495_00758
Unannotated protein.
  
     0.556
Your Current Organism:
Pseudoalteromonas prydzensis
NCBI taxonomy Id: 182141
Other names: ACAM 620, CIP 105820, DSM 14232, LMG 21428, LMG:21428, P. prydzensis, strain MB8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.