STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661495_00519Unannotated protein. (209 aa)    
Predicted Functional Partners:
GCA_001661495_01966
Unannotated protein.
    
 0.639
GCA_001661495_03723
Unannotated protein.
    
 0.639
GCA_001661495_02472
Unannotated protein.
  
  
  0.618
GCA_001661495_01726
Unannotated protein.
    
  0.596
GCA_001661495_03956
Unannotated protein.
    
 0.575
GCA_001661495_00518
Unannotated protein.
       0.513
GCA_001661495_00517
Unannotated protein.
       0.452
GCA_001661495_02997
Unannotated protein.
     
 0.427
GCA_001661495_02293
Unannotated protein.
     
 0.425
GCA_001661495_01765
Unannotated protein.
  
  
 0.419
Your Current Organism:
Pseudoalteromonas prydzensis
NCBI taxonomy Id: 182141
Other names: ACAM 620, CIP 105820, DSM 14232, LMG 21428, LMG:21428, P. prydzensis, strain MB8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.